Examples of DicomInputStream

Examples of org.dcm4che3.io.DicomInputStream

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            main.setEncodingOptions(CLIUtils.encodingOptionsOf(cl));
            try {
                if (cl.hasOption("i")) {
                    String fname = cl.getOptionValue("i");
                    if (fname.equals("-")) {
                        main.parse(new DicomInputStream(System.in));
                    } else {
                        DicomInputStream dis =
                                new DicomInputStream(new File(fname));
                        try {
                            main.parse(dis);
                        } finally {
                            dis.close();
                        }
                    }
                }

                if (cl.hasOption("j"))
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Examples of org.dcm4che3.io.DicomInputStream

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        if (!from.renameTo(dest))
            throw new IOException("Failed to rename " + from + " to " + dest);
    }

    private static Attributes parse(File file) throws IOException {
        DicomInputStream in = new DicomInputStream(file);
        try {
            in.setIncludeBulkData(IncludeBulkData.NO);
            return in.readDataset(-1, Tag.PixelData);
        } finally {
            SafeClose.close(in);
        }
    }
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Examples of org.dcm4che3.io.DicomInputStream

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    }

    private static Attributes loadDicomObject(File f) throws IOException {
        if (f == null)
            return null;
        DicomInputStream dis = new DicomInputStream(f);
        try {
            return dis.readDataset(-1, -1);
        } finally {
            SafeClose.close(dis);
        }
    }
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Examples of org.dcm4che3.io.DicomInputStream

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    }

    public void validate(File file) {
        if (iod == null)
            throw new IllegalStateException("IOD net initialized");
        DicomInputStream dis = null;
        try {
            System.out.print("Validate: " + file + " ... ");
            dis = new DicomInputStream(file);
            Attributes attrs = dis.readDataset(-1, -1);
            ValidationResult result = attrs.validate(iod);
            if (result.isValid())
                System.out.println("OK");
            else {
                System.out.println("FAILED:");
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Examples of org.dcm4che3.io.DicomInputStream

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            return;

        if (iis == null)
            throw new IllegalStateException("Input not set");

        dis = new DicomInputStream(new ImageInputStreamAdapter(iis));
        dis.setIncludeBulkData(IncludeBulkData.URI);
        dis.setBulkDataDescriptor(BulkDataDescriptor.PIXELDATA);
        dis.setURI("java:iis"); // avoid copy of pixeldata to temporary file
        Attributes fmi = dis.readFileMetaInformation();
        Attributes ds = dis.readDataset(-1, -1);
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Examples of org.dcm4che3.io.DicomInputStream

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       }
       assertEquals(4, readAttributes().size());
    }

    private Attributes readAttributes() throws IOException {
        DicomInputStream in = new DicomInputStream(file);
        try {
            return in.readDataset(-1, -1);
        } finally {
            in.close();
        }
    }
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Examples of org.dcm4che3.io.DicomInputStream

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    private static Attributes readFromResource(String name,
            IncludeBulkData includeBulkData)
            throws Exception {
        ClassLoader cl = Thread.currentThread().getContextClassLoader();
        DicomInputStream in = new DicomInputStream(
                new File(cl.getResource(name).toURI()));
        try {
            in.setIncludeBulkData(includeBulkData);
            return in.readDataset(-1, -1);
        } finally {
            in.close();
        }
    }
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Examples of org.dcm4che3.io.DicomInputStream

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    protected DicomDirReader(File file, String mode) throws IOException {
        this.file = file;
        this.raf = new RandomAccessFile(file, mode);
        try {
            this.in = new DicomInputStream(new RAFInputStreamAdapter(raf));
            this.fmi = in.readFileMetaInformation();
            this.fsInfo = in.readDataset(-1, Tag.DirectoryRecordSequence);
            if (in.tag() != Tag.DirectoryRecordSequence)
                throw new IOException("Missing Directory Record Sequence");
        } catch (IOException e) {
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Examples of org.dcm4che3.io.DicomInputStream

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        if (!from.renameTo(dest))
            throw new IOException("Failed to rename " + from + " to " + dest);
    }

    private static Attributes parse(File file) throws IOException {
        DicomInputStream in = new DicomInputStream(file);
        try {
            in.setIncludeBulkData(IncludeBulkData.NO);
            return in.readDataset(-1, Tag.PixelData);
        } finally {
            SafeClose.close(in);
        }
    }
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Examples of org.dcm4che3.io.DicomInputStream

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    }

    private static Attributes readDataset(String name)
            throws Exception {
        ClassLoader cl = Thread.currentThread().getContextClassLoader();
        DicomInputStream in = new DicomInputStream(
                new File(cl.getResource(name).toURI()));
        try {
            return in.readDataset(-1, -1);
        } finally {
            in.close();
        }
    }
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