Examples of validateBamFileTermination()

Examples of htsjdk.samtools.SamFileValidator.validateBamFileTermination()

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            if (VALIDATE_INDEX){
                validator.setValidateIndex(VALIDATE_INDEX);
            }
            if (IOUtil.isRegularPath(INPUT)) {
                // Do not check termination if reading from a stream
                validator.validateBamFileTermination(INPUT);
            }

            result = false;

            switch (MODE) {
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