Assert.assertFalse(positivePTA.containsSequence(s));Assert.assertTrue(negativePTA.containsSequence(s));
}
else
{
++positive;
Assert.assertTrue(positivePTA.containsSequence(s));Assert.assertFalse(negativePTA.containsSequence(s));
}
Assert.assertEquals(posOrNegPerChunk*(i+1), positive);Assert.assertEquals(positive,positivePTA.getData(PTASequenceEngine.truePred).size());
Assert.assertEquals(positive,positivePTA.getData().size());// all seq are accept ones
Assert.assertEquals(posOrNegPerChunk*(i+1), negative);Assert.assertEquals(negative,negativePTA.getData(PTASequenceEngine.truePred).size());
Assert.assertEquals(0,negativePTA.getData().size());// all seq are reject ones