Package org.sbml.jsbml

Examples of org.sbml.jsbml.CVTerm.addResource()


    CVTerm term = new  CVTerm(); // TODO: difference to document => CVTerm term = new  CVTerm(CVTerm.Type.MODEL_QUALIFIER); constructor does not exist
    term.setQualifierType(CVTerm.Type.MODEL_QUALIFIER);   
    String resource =  "GO6666";
    assertTrue( term != null );
    assertTrue( term.getQualifierType() == CVTerm.Type.MODEL_QUALIFIER ); // TODO: difference to document ==> CVTerm.Type.MODEL_QUALIFIER
    term.addResource(resource);
    List<String> xa = term.getResources(); // TODO: difference to document ==> term.getResources(); does not return XMLAttributes but a List<String>
    assertTrue( xa.size() == 1 );
    // assertTrue(xa.getName(0).equals( "rdf:resource"));
    assertTrue(xa.get(0).equals( "GO6666"));
    term = null;
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    CVTerm term = new  CVTerm();
    term.setQualifierType(CVTerm.Type.MODEL_QUALIFIER);
    String resource =  "GO6666";
    String resource1 =  "OtherURI";
    long number;
    term.addResource(resource);
    term.addResource(resource1);
    number = term.getResourceCount();
    assertTrue( number == 2 );
    assertTrue(term.getResourceURI(0).equals( "GO6666"));
    assertTrue(term.getResourceURI(1).equals( "OtherURI"));
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    term.setQualifierType(CVTerm.Type.MODEL_QUALIFIER);
    String resource =  "GO6666";
    String resource1 =  "OtherURI";
    long number;
    term.addResource(resource);
    term.addResource(resource1);
    number = term.getResourceCount();
    assertTrue( number == 2 );
    assertTrue(term.getResourceURI(0).equals( "GO6666"));
    assertTrue(term.getResourceURI(1).equals( "OtherURI"));
    term = null;
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    Model m = doc.createModel("model");

    CVTerm term = new CVTerm();
    term.setQualifierType(Type.MODEL_QUALIFIER);
    term.setModelQualifierType(Qualifier.BQM_IS);
    term.addResource("urn:miriam:kegg.pathway:hsa00010");
    m.addCVTerm(term);

    History history = new History();
    Creator creator = new Creator();
    creator.setFamilyName("Dr\u00e4ger");
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    CVTerm term = new  CVTerm(); // TODO : difference to document => CVTerm term = new  CVTerm(CVTerm.Type.MODEL_QUALIFIER); constructor does not exist
    term.setQualifierType(CVTerm.Type.MODEL_QUALIFIER);   
    String resource =  "GO6666";
    assertTrue( term != null );
    assertTrue( term.getQualifierType() == CVTerm.Type.MODEL_QUALIFIER ); // TODO : difference to document ==> CVTerm.Type.MODEL_QUALIFIER
    term.addResource(resource);
    List<String> xa = term.getResources(); // TODO : difference to document ==> term.getResources(); does not return XMLAttributes but a List<String>
    assertTrue( xa.size() == 1 );
    // assertTrue(xa.getName(0).equals( "rdf:resource"));
    assertTrue(xa.get(0).equals( "GO6666"));
    term = null;
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    CVTerm term = new  CVTerm();
    term.setQualifierType(CVTerm.Type.MODEL_QUALIFIER);
    String resource =  "GO6666";
    String resource1 =  "OtherURI";
    long number;
    term.addResource(resource);
    term.addResource(resource1);
    number = term.getNumResources();
    assertTrue( number == 2 );
    assertTrue(term.getResourceURI(0).equals( "GO6666"));
    assertTrue(term.getResourceURI(1).equals( "OtherURI"));
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    term.setQualifierType(CVTerm.Type.MODEL_QUALIFIER);
    String resource =  "GO6666";
    String resource1 =  "OtherURI";
    long number;
    term.addResource(resource);
    term.addResource(resource1);
    number = term.getNumResources();
    assertTrue( number == 2 );
    assertTrue(term.getResourceURI(0).equals( "GO6666"));
    assertTrue(term.getResourceURI(1).equals( "OtherURI"));
    term = null;
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    CVTerm term = new  CVTerm(); // TODO : difference to document => CVTerm term = new  CVTerm(CVTerm.Type.MODEL_QUALIFIER); constructor does not exist
    term.setQualifierType(CVTerm.Type.MODEL_QUALIFIER);   
    String resource =  "GO6666";
    assertTrue( term != null );
    assertTrue( term.getQualifierType() == CVTerm.Type.MODEL_QUALIFIER ); // TODO : difference to document ==> CVTerm.Type.MODEL_QUALIFIER
    term.addResource(resource);
    List<String> xa = term.getResources(); // TODO : difference to document ==> term.getResources(); does not return XMLAttributes but a List<String>
    assertTrue( xa.size() == 1 );
    // assertTrue(xa.getName(0).equals( "rdf:resource"));
    assertTrue(xa.get(0).equals( "GO6666"));
    term = null;
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    CVTerm term = new  CVTerm();
    term.setQualifierType(CVTerm.Type.MODEL_QUALIFIER);
    String resource =  "GO6666";
    String resource1 =  "OtherURI";
    long number;
    term.addResource(resource);
    term.addResource(resource1);
    number = term.getNumResources();
    assertTrue( number == 2 );
    assertTrue(term.getResourceURI(0).equals( "GO6666"));
    assertTrue(term.getResourceURI(1).equals( "OtherURI"));
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    term.setQualifierType(CVTerm.Type.MODEL_QUALIFIER);
    String resource =  "GO6666";
    String resource1 =  "OtherURI";
    long number;
    term.addResource(resource);
    term.addResource(resource1);
    number = term.getNumResources();
    assertTrue( number == 2 );
    assertTrue(term.getResourceURI(0).equals( "GO6666"));
    assertTrue(term.getResourceURI(1).equals( "OtherURI"));
    term = null;
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