Package org.openbel.framework.core.indexer

Examples of org.openbel.framework.core.indexer.JDBMEquivalenceLookup.lookup()


                // ... do we have set membership?
                JDBMEquivalenceLookup jdbmLookup = lookups.get(rl);
                if (jdbmLookup == null) {
                    continue;
                }
                SkinnyUUID uuid = jdbmLookup.lookup(val);
                // Check for set membership, uuid ∊ uuids
                if (uuids.contains(uuid)) {

                    // This indicates equivalent parameters are being
                    // used by both document and network. This
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                JDBMEquivalenceLookup jdbmLookup = lookups.get(rl);
                if (jdbmLookup == null) {
                    continue;
                }

                SkinnyUUID uuid = jdbmLookup.lookup(val);
                if (uuid != null) {
                    uuids.add(uuid);
                }
            }
        }
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            JDBMEquivalenceLookup jdbmLookup = lookups.get(rl);
            if (jdbmLookup == null) {
                continue;
            }

            SkinnyUUID uuid = jdbmLookup.lookup(value);
            if (uuid != null) {
                pnUUIDs.add(uuid);
            }
        }
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            JDBMEquivalenceLookup jdbmLookup = lookups.get(rl);
            if (jdbmLookup == null) {
                continue;
            }

            SkinnyUUID uuid = jdbmLookup.lookup(val);
            if (uuid != null) {
                uuids.add(uuid);
            }
        }
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                            .getResourceLocation());
                    if (lookup == null) {
                        continue;
                    }

                    uuid = lookup.lookup(subjectParam.getValue());
                    paramcache.put(subjectParam, uuid);
                }

                // if there is a proto network term with this UUID contained, then
                // this orthologous statement intersects the proto network, continue
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                            .getResourceLocation());
                    if (lookup == null) {
                        continue;
                    }

                    uuid = lookup.lookup(objectParam.getValue());
                    paramcache.put(objectParam, uuid);
                }

                // if there is a proto network term with this UUID contained, then
                // this orthologous statement intersects the proto network, continue
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