Examples of org.apache.commons.math.ode.FirstOrderIntegrator.integrate()

Class org.apache.commons.math.ode.FirstOrderIntegrator

Examples of org.apache.commons.math.ode.FirstOrderIntegrator.integrate()

org.apache.commons.math.ode.FirstOrderIntegrator.integrate()
Integrate the differential equations up to the given time.
This method solves an Initial Value Problem (IVP).

Since this method stores some internal state variables made available in its public interface during integration ( {@link #getCurrentSignedStepsize()}), it is not thread-safe.
@param equations differential equations to integrate @param t0 initial time @param y0 initial value of the state vector at t0 @param t target time for the integration(can be set to a value smaller than t0 for backward integration) @param y placeholder where to put the state vector at each successfulstep (and hence at the end of integration), can be the same object as y0 @throws IntegratorException if the integrator cannot perform integration @throws DerivativeException this exception is propagated to the caller ifthe underlying user function triggers one


    FirstOrderIntegrator integ = new DormandPrince853Integrator(minStep, maxStep,
                                                               scalAbsoluteTolerance,
                                                               scalRelativeTolerance);
    integ.addStepHandler(new VariableHandler());
    double stopTime = integ.integrate(pb,
                                      pb.getInitialTime(), pb.getInitialState(),
                                      pb.getFinalTime(), new double[pb.getDimension()]);
    assertEquals(pb.getFinalTime(), stopTime, 1.0e-10);
    assertEquals("Dormand-Prince 8 (5, 3)", integ.getName());
  }

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    FirstOrderIntegrator integ = new DormandPrince853Integrator(minStep, maxStep,
                                                                scalAbsoluteTolerance,
                                                                scalRelativeTolerance);
    integ.addStepHandler(DummyStepHandler.getInstance());
    integ.integrate(pb1,
                    pb1.getInitialTime(), pb1.getInitialState(),
                    pb1.getFinalTime(), new double[pb1.getDimension()]);
    int callsWithoutDenseOutput = pb1.getCalls();
    assertEquals(integ.getEvaluations(), callsWithoutDenseOutput);

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                    pb1.getFinalTime(), new double[pb1.getDimension()]);
    int callsWithoutDenseOutput = pb1.getCalls();
    assertEquals(integ.getEvaluations(), callsWithoutDenseOutput);


    integ.addStepHandler(new InterpolatingStepHandler());
    integ.integrate(pb2,
                    pb2.getInitialTime(), pb2.getInitialState(),
                    pb2.getFinalTime(), new double[pb2.getDimension()]);
    int callsWithDenseOutput = pb2.getCalls();
    assertEquals(integ.getEvaluations(), callsWithDenseOutput);

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    final StepProblem stepProblem = new StepProblem(0.0, 1.0, 2.0);
    FirstOrderIntegrator integ =
      new DormandPrince853Integrator(0.1, 10, 1.0e-12, 0.0);
    integ.addEventHandler(stepProblem, 1.0, 1.0e-12, 1000);
    double[] y = { Double.NaN };
    integ.integrate(stepProblem, 0.0, new double[] { 0.0 }, 10.0, y);
    assertEquals(8.0, y[0], 1.0e-12);
  }


  private static class KeplerHandler implements StepHandler {
    public KeplerHandler(TestProblem3 pb) {

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        SummaryStatistics residualsP0 = new SummaryStatistics();
        SummaryStatistics residualsP1 = new SummaryStatistics();
        for (double b = 2.88; b < 3.08; b += 0.001) {
            Brusselator brusselator = new Brusselator(b);
            double[] y = { 1.3, b };
            integ.integrate(brusselator, 0, y, 20.0, y);
            double[] yP = { 1.3, b + hP };
            brusselator.setParameter(0, b + hP);
            integ.integrate(brusselator, 0, yP, 20.0, yP);
            residualsP0.addValue((yP[0] - y[0]) / hP - brusselator.dYdP0());
            residualsP1.addValue((yP[1] - y[1]) / hP - brusselator.dYdP1());

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            Brusselator brusselator = new Brusselator(b);
            double[] y = { 1.3, b };
            integ.integrate(brusselator, 0, y, 20.0, y);
            double[] yP = { 1.3, b + hP };
            brusselator.setParameter(0, b + hP);
            integ.integrate(brusselator, 0, yP, 20.0, yP);
            residualsP0.addValue((yP[0] - y[0]) / hP - brusselator.dYdP0());
            residualsP1.addValue((yP[1] - y[1]) / hP - brusselator.dYdP1());
        }
        Assert.assertTrue((residualsP0.getMax() - residualsP0.getMin()) > 600);
        Assert.assertTrue(residualsP0.getStandardDeviation() > 30);

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        SummaryStatistics residualsP0 = new SummaryStatistics();
        SummaryStatistics residualsP1 = new SummaryStatistics();
        for (double b = 2.88; b < 3.08; b += 0.001) {
            Brusselator brusselator = new Brusselator(b);
            double[] y = { 1.3, b };
            integ.integrate(brusselator, 0, y, 20.0, y);
            double[] yP = { 1.3, b + hP };
            brusselator.setParameter(0, b + hP);
            integ.integrate(brusselator, 0, yP, 20.0, yP);
            residualsP0.addValue((yP[0] - y[0]) / hP - brusselator.dYdP0());
            residualsP1.addValue((yP[1] - y[1]) / hP - brusselator.dYdP1());

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            Brusselator brusselator = new Brusselator(b);
            double[] y = { 1.3, b };
            integ.integrate(brusselator, 0, y, 20.0, y);
            double[] yP = { 1.3, b + hP };
            brusselator.setParameter(0, b + hP);
            integ.integrate(brusselator, 0, yP, 20.0, yP);
            residualsP0.addValue((yP[0] - y[0]) / hP - brusselator.dYdP0());
            residualsP1.addValue((yP[1] - y[1]) / hP - brusselator.dYdP1());
        }
        Assert.assertTrue((residualsP0.getMax() - residualsP0.getMin()) > 0.02);
        Assert.assertTrue((residualsP0.getMax() - residualsP0.getMin()) < 0.03);

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        EventHandler[] functions = pb.getEventsHandlers();
        for (int l = 0; l < functions.length; ++l) {
          integ.addEventHandler(functions[l],
                                     Double.POSITIVE_INFINITY, 1.0e-6 * step, 1000);
        }
        double stopTime = integ.integrate(pb,
                                          pb.getInitialTime(), pb.getInitialState(),
                                          pb.getFinalTime(), new double[pb.getDimension()]);
        if (functions.length == 0) {
            assertEquals(pb.getFinalTime(), stopTime, 1.0e-10);
        }

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    double step = (pb.getFinalTime() - pb.getInitialTime()) * 0.001;


    FirstOrderIntegrator integ = new MidpointIntegrator(step);
    TestProblemHandler handler = new TestProblemHandler(pb, integ);
    integ.addStepHandler(handler);
    integ.integrate(pb,
                    pb.getInitialTime(), pb.getInitialState(),
                    pb.getFinalTime(), new double[pb.getDimension()]);


    assertTrue(handler.getLastError() < 2.0e-7);
    assertTrue(handler.getMaximalValueError() < 1.0e-6);

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