for(String id : ontology.getTerms().keySet()) {
OntologyTerm term = ontology.getTerms().get(id);
//SciXMLDocument sxd = new SciXMLDocument();
//sxd.setTitle(term.getName());
sxd.getNewDiv(term.getId());
sxd.addPara().appendChild(term.getName());
if(term.getDef() != null) {
sxd.addPara().appendChild(term.getDef());
if(term.getDef().matches(".*[Rr]eaction.*")) reacts++;
}