for (int tagno = 0; tagno < libraries[i].size(); tagno++) {
NucleotideSequence t = libraries[i].getSequenceAt(tagno);
//setStatus(t.getName());
for (Iterator<CandidateAnalysisModule> m = modules.iterator(); m.hasNext(); ) {
ProbeAnalysisModule mod = (ProbeAnalysisModule) m.next();
if (!mod.acceptTag(t, probeset)) {
//log.printLine(t.getName() + " not accepted by " + PlugInDescriptor.getBriefDescription(mod)); //$NON-NLS-1$
badTags[i].add(new Integer(tagno));
}
}
}