Package org.apache.airavata.common.workflow.execution.context

Examples of org.apache.airavata.common.workflow.execution.context.WorkflowContextHeaderBuilder

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     */

  public java.lang.String launchWorkflow(java.lang.String workflowAsString, java.lang.String topic, NameValue[] inputs) throws XMLStreamException {
        OMElement workflowContext = getWorkflowContextHeader();
        Map<String, String> configuration = new HashMap<String, String>();
        WorkflowContextHeaderBuilder workflowContextHeaderBuilder = parseContextHeader(workflowContext, configuration);
        String s = null;
        try {
             s = setupAndLaunch(workflowAsString, topic,
                    (String) configurationContext.getProperty(MYPROXY_USER), (String) configurationContext.getProperty(MYPROXY_PASS), inputs, configuration, runInThread, workflowContextHeaderBuilder);
        } catch (XMLStreamException e) {
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            configuration.put(GFAC, parse.getContextHeader().getSoaServiceEprs().getGfacUrl());
            configuration.put(MSGBOX, parse.getContextHeader().getWorkflowMonitoringContext().getMsgBoxEpr());
        } catch (XmlException e) {
            e.printStackTrace();  //To change body of catch statement use File | Settings | File Templates.
        }
        return new WorkflowContextHeaderBuilder(parse.getContextHeader());
    }
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  }
  private void initialize() throws MalformedURLException {
    updateClientConfiguration(configuration);
   
        // At this point we do not know the workflowExperimentId
    builder = new WorkflowContextHeaderBuilder(configuration.get(BROKER),
            configuration.get(GFAC),configuration.get(JCR),null,null,
            configuration.get(MSGBOX));
   
    //TODO: At some point this should contain the current user the airavata client is
    //logged in to the Airavata system
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    }

    private void setup(WsdlDefinitions definitions) throws WorkflowException {

        // Set LEAD context header.
        WorkflowContextHeaderBuilder builder;
        if(contextHeader == null){
            builder = new WorkflowContextHeaderBuilder(this.notifier.getEventSink()
                .getAddress(), this.gfacURL, null, this.topic,
                "xbaya-experiment", this.messageBoxURL);
        }else{
             builder = new WorkflowContextHeaderBuilder(contextHeader);
        }
        if(builder.getWorkflowMonitoringContext() == null){
            builder.addWorkflowMonitoringContext(this.notifier.getEventSink().getAddress(),
                    this.topic,this.nodeID,this.messageBoxURL);
        } else {
            builder.getWorkflowMonitoringContext().setWorkflowInstanceId(this.notifier.getWorkflowID().toASCIIString());
        }
        builder.getWorkflowMonitoringContext().setWorkflowNodeId(this.nodeID);
        builder.getWorkflowMonitoringContext().setServiceInstanceId(this.nodeID);
        builder.getWorkflowMonitoringContext().setWorkflowTimeStep(1);
        builder.setUserIdentifier("xbaya-user");
        //todo write a UI component to collect this information and pass it through Header
//        builder.setGridMyProxyRepository("myproxy.nersc.gov","$user","$passwd",14000);
        StickySoapHeaderHandler handler = new StickySoapHeaderHandler("use-workflowcontext-header", builder.getXml());
        // Create Invoker
        this.invoker = InvokerFactory.createInvoker(this.portTypeQName, definitions, this.gfacURL, this.messageBoxURL,
                builder, true);
        this.invoker.setup();
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                    }
                    XBayaConfiguration configuration = engine.getConfiguration();
                    String myProxyUsername = configuration.getRegistryUserName();
                    String myProxyPass = configuration.getRegistryPassphrase();
                    //todo we need to add the workflowContext header in the message
                    WorkflowContextHeaderBuilder builder = new WorkflowContextHeaderBuilder(configuration.getBrokerURL().toASCIIString(),
                            configuration.getGFacURL().toASCIIString(),configuration.getRegistryURL().toASCIIString(),configuration.getTopic()
                            ,null,configuration.getMessageBoxURL().toASCIIString());
                    stub._getServiceClient().addHeader(AXIOMUtil.stringToOM(XMLUtil.xmlElementToString(builder.getXml())));
                    stub.launchWorkflow(workflow.toXMLText(), topicString,inputNameVals);
                    engine.getConfiguration().getJcrComponentRegistry().getRegistry().updateExperimentName(topicString, instanceNameFinal);
                } catch (Exception e) {
                    WorkflowInterpreterLaunchWindow.this.engine.getGUI().getErrorWindow().error(e);
                }
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                "    <wor:workflow-scheduling-context />\n" +
                "    <wor:security-context />\n" +
                "</wor:context-header>");
        }
        Map<String, String> configuration = new HashMap<String, String>();
        WorkflowContextHeaderBuilder workflowContextHeaderBuilder = parseContextHeader(workflowContext, configuration);
        String user = workflowContextHeaderBuilder.getUserIdentifier();

        String s = null;
        try {
             s = setupAndLaunch(workflowAsString, topic, ServerSettings.getDefaultGatewayId(),
                    user,inputs, configuration, runInThread, workflowContextHeaderBuilder);
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        } catch (XmlException e) {
            log.error(e.getMessage());
        } catch (AiravataAPIInvocationException e) {
            log.error(e.getMessage());
        }
        return new WorkflowContextHeaderBuilder(parse.getContextHeader());
    }
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                "    <wor:workflow-scheduling-context />\n" +
                "    <wor:security-context />\n" +
                "</wor:context-header>");
        }
        Map<String, String> configuration = new HashMap<String, String>();
        WorkflowContextHeaderBuilder workflowContextHeaderBuilder = parseContextHeader(workflowContext, configuration);
        String user = workflowContextHeaderBuilder.getSubmissionUser();

        String s = null;
        try {
             s = setupAndLaunch(workflowAsString, topic, ServerSettings.getSystemUserGateway(),
                    user,inputs, configuration, runInThread, workflowContextHeaderBuilder);
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            log.error(e.getMessage());
        } catch (AiravataAPIInvocationException e) {
            log.error(e.getMessage());
        }
      String submissionUser = workflowContext.getAttributeValue(new QName(workflowContext.getNamespace().getNamespaceURI(), "submissionUser"));
        WorkflowContextHeaderBuilder workflowContextHeaderBuilder = new WorkflowContextHeaderBuilder(parse.getContextHeader());
        workflowContextHeaderBuilder.setSubmissionUser(submissionUser);
    return workflowContextHeaderBuilder;
    }
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          String submissionUser = getClient().getUserManager().getAiravataUser();
      String executionUser=options.getExperimentExecutionUser();
      if (executionUser==null){
        executionUser=submissionUser;
      }
      WorkflowContextHeaderBuilder builder = AiravataAPIUtils.createWorkflowContextHeaderBuilder(options, executionUser, submissionUser);
      runPreWorkflowExecutionTasks(experimentID, executionUser, options.getExperimentMetadata(), options.getExperimentName());
      NameValue[] inputVals = inputValues.toArray(new NameValue[] {});
      if (listener!=null){
        getExperimentMonitor(experimentID, listener).startMonitoring();
      }
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Related Classes of org.apache.airavata.common.workflow.execution.context.WorkflowContextHeaderBuilder

  • org.apache.airavata.client.airavata.AiravataClient
  • org.apache.airavata.client.AiravataAPIUtils
  • org.apache.airavata.client.AiravataClient
  • org.apache.airavata.client.impl.ExecutionManagerImpl
  • org.apache.airavata.schemas.wec.ContextHeaderDocument
  • org.apache.airavata.schemas.wec.NameValuePairType
  • org.apache.airavata.xbaya.experiment.gui.WorkflowInterpreterLaunchWindow
  • org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton
  • org.apache.airavata.xbaya.invoker.GenericInvoker
  • org.apache.airavata.xbaya.ui.experiment.WorkflowInterpreterLaunchWindow
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