Examples of AlignmentUnrecognizedTypeException

Examples of org.lightforge.bioinformatics.alignment.AlignmentUnrecognizedTypeException

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          (_row == 0) &&
          (_column == 0));
    case LOCAL:
      return (_score == 0);
    default:
      throw new AlignmentUnrecognizedTypeException(_context.get_alignmentType().toString());
    }
  }
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Examples of org.lightforge.bioinformatics.alignment.AlignmentUnrecognizedTypeException

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      break;
    case LOCAL:
      maxScore = 0;
      break;
    default:
      throw new AlignmentUnrecognizedTypeException(alignmentType.toString());
    }
   
    for (EvaluationItem ei : evalVector) {
      if (ei != null) maxScore = Math.max(maxScore, ei.get_score());
    }
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