/*
* Copyright (c) 2007-2012 The Broad Institute, Inc.
* SOFTWARE COPYRIGHT NOTICE
* This software and its documentation are the copyright of the Broad Institute, Inc. All rights are reserved.
*
* This software is supplied without any warranty or guaranteed support whatsoever. The Broad Institute is not responsible for its use, misuse, or functionality.
*
* This software is licensed under the terms of the GNU Lesser General Public License (LGPL),
* Version 2.1 which is available at http://www.opensource.org/licenses/lgpl-2.1.php.
*/
package org.broad.igv.sam.reader;
import htsjdk.samtools.SAMRecord;
import htsjdk.samtools.util.CloseableIterator;
import org.broad.igv.sam.PicardAlignment;
/**
* @author jrobinso
* @since Sep 22, 2009
*/
public class WrappedIterator implements CloseableIterator<PicardAlignment> {
CloseableIterator<SAMRecord> iter;
public WrappedIterator(CloseableIterator<SAMRecord> iter) {
this.iter = iter;
}
public void close() {
iter.close();
}
public boolean hasNext() {
return iter.hasNext();
}
public PicardAlignment next() {
return new PicardAlignment(iter.next());
}
public void remove() {
iter.remove();
}
}