Package uk.ac.cam.ch.wwmm.ptclib.scixml

Examples of uk.ac.cam.ch.wwmm.ptclib.scixml.SciXMLDocument.copy()


      Element e = (Element)n.get(i);
      e.addAttribute(new Attribute("surface", e.getValue()));
    }
   
    SciXMLDocument inlineDoc = SciXMLDocument.makeFromDoc(new Builder().build(sourceFile));
    Document sourceDoc = (Document)inlineDoc.copy();
    PaperToScrapBook.importAnnotations(this, inlineDoc);
    new Serializer(new FileOutputStream(destFile)).write(inlineDoc);
    Document safDoc = InlineToSAF.extractSAFs(inlineDoc, sourceDoc, name);
    SciBorgPostProcess.postProcess(safDoc, false);
    SafTools.numberSaf(safDoc, "oscar", "o");
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