Package org.codehaus.staxmate.out

Examples of org.codehaus.staxmate.out.SMOutputElement.addCharacters()

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    }
    if (sbmlDocument.isSetAnnotation()) {
      writeAnnotation(sbmlDocument, smOutputElement, streamWriter,
          indent, false);
    }
    smOutputElement.addCharacters("\n");

    writeSBMLElements(xmlObject, smOutputElement, streamWriter,
        sbmlDocument, indent);

    outputDocument.closeRoot();
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      }
     
    }
   
   
    rdfElement.addCharacters("\n");
    rdfElement.setIndentation(whiteSpace + createIndentationString(indentCount), indent + indentCount, indentCount);
    SMOutputElement descriptionElement = rdfElement.addElement(namespace,
        "Description");
    descriptionElement.addAttribute(namespace, "about",
        annotation.getAbout());
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    rdfElement.setIndentation(whiteSpace + createIndentationString(indentCount), indent + indentCount, indentCount);
    SMOutputElement descriptionElement = rdfElement.addElement(namespace,
        "Description");
    descriptionElement.addAttribute(namespace, "about",
        annotation.getAbout());
    descriptionElement.addCharacters("\n");
    if (annotation.isSetHistory()) {
      writeHistory(annotation.getHistory(), rdfNamespaces, writer,
          indent + 4);
    }
    if (annotation.getListOfCVTerms().size() > 0) {
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    if (annotation.getListOfCVTerms().size() > 0) {
      writeCVTerms(annotation.getListOfCVTerms(), rdfNamespaces, writer,
          indent + indentCount);
    }
    descriptionElement.setIndentation(whiteSpace + createIndentationString(indentCount), indent + indentCount, indentCount);
    descriptionElement.addCharacters(whiteSpace + createIndentationString(indentCount));
    annotationElement.setIndentation(whiteSpace, indent, indentCount);
    rdfElement.addCharacters("\n");
    rdfElement.addCharacters(whiteSpace);
    annotationElement.addCharacters("\n");
  }
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          elementIsNested = true;
        }

        // to allow the XML parser to prune empty element, this line should not be added in all the cases.
        if (elementIsNested) {
          newOutPutElement.addCharacters("\n");
          if (isClosedMathContainer || isClosedAnnotation) {
            newOutPutElement.addCharacters(whiteSpaces);
          }
        }
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        // to allow the XML parser to prune empty element, this line should not be added in all the cases.
        if (elementIsNested) {
          newOutPutElement.addCharacters("\n");
          if (isClosedMathContainer || isClosedAnnotation) {
            newOutPutElement.addCharacters(whiteSpaces);
          }
        }

        writeSBMLElements(childXmlObject, newOutPutElement,
            streamWriter, nextObjectToWrite, indent + indentCount);
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    }
    if (sbmlDocument.isSetAnnotation()) {
      writeAnnotation(sbmlDocument, smOutputElement, streamWriter,
          indent, false);
    }
    smOutputElement.addCharacters("\n");

    writeSBMLElements(xmlObject, smOutputElement, streamWriter,
        sbmlDocument, indent);

    outputDocument.closeRoot();
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      }
     
    }
   
   
    rdfElement.addCharacters("\n");
    rdfElement.setIndentation(whiteSpace + createIndentationString(indentCount), indent + indentCount, indentCount);
    SMOutputElement descriptionElement = rdfElement.addElement(namespace,
        "Description");
    descriptionElement.addAttribute(namespace, "about",
        annotation.getAbout());
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    rdfElement.setIndentation(whiteSpace + createIndentationString(indentCount), indent + indentCount, indentCount);
    SMOutputElement descriptionElement = rdfElement.addElement(namespace,
        "Description");
    descriptionElement.addAttribute(namespace, "about",
        annotation.getAbout());
    descriptionElement.addCharacters("\n");
    if (annotation.isSetHistory()) {
      writeHistory(annotation.getHistory(), rdfNamespaces, writer,
          indent + 4);
    }
    if (annotation.getListOfCVTerms().size() > 0) {
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    if (annotation.getListOfCVTerms().size() > 0) {
      writeCVTerms(annotation.getListOfCVTerms(), rdfNamespaces, writer,
          indent + indentCount);
    }
    descriptionElement.setIndentation(whiteSpace + createIndentationString(indentCount), indent + indentCount, indentCount);
    descriptionElement.addCharacters(whiteSpace + createIndentationString(indentCount));
    annotationElement.setIndentation(whiteSpace, indent, indentCount);
    rdfElement.addCharacters("\n");
    rdfElement.addCharacters(whiteSpace);
    annotationElement.addCharacters("\n");
  }
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