Package net.sf.mzmine.data

Examples of net.sf.mzmine.data.Scan.addMassList()

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          massDetector.getParameterSet());

      SimpleMassList newMassList = new SimpleMassList(name, scan, mzPeaks);

      // Add new mass list to the scan
      scan.addMassList(newMassList);

      processedScans++;
    }

    setStatus(TaskStatus.FINISHED);
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    // that is where the mass list data will be stored. This is a hack
    // because in MZmine 2.3 and 2.4 the mass lists were saved as XML
    // instead of being part of the data points file.
    for (SimpleMassList ml : allMassLists) {
      Scan s = ml.getScan();
      s.addMassList(ml);
    }

    RawDataFile rawDataFile = newRawDataFile.finishWriting();
    return rawDataFile;
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          mzPeaks, parameters);

      SimpleMassList newMassList = new SimpleMassList(massListName + " "
          + suffix, scan, newMzPeaks);

      scan.addMassList(newMassList);

      // Remove old mass list
      if (autoRemove)
        scan.removeMassList(massList);
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