Package htsjdk.variant.variantcontext

Examples of htsjdk.variant.variantcontext.VariantContextBuilder.start()


    @Before
    public void setUp() throws Exception {
        super.setUp();
        VariantContextBuilder builder = new VariantContextBuilder();
        //Convert from exclusive end to inclusive end
        builder.start(start + 1).stop(end).chr(chr).alleles(alleles);
        VariantContext vc = builder.make();
        mvc = VariantReviewSource.createMVC(allele0, allele1, callsetName, vc, truthStatus, false);

        int errorsResetting = 0;
        try {
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