proteinKeys.clear();
ProteinTableModel proteinTableModel = (ProteinTableModel) proteinTable.getModel();
proteinTableModel.reset();
proteinTableModel.fireTableDataChanged();
((TitledBorder) proteinPanel.getBorder()).setTitle(PeptideShakerGUI.TITLED_BORDER_HORIZONTAL_PADDING + "Proteins" + PeptideShakerGUI.TITLED_BORDER_HORIZONTAL_PADDING);
proteinPanel.repaint();
((TitledBorder) plotsPanel.getBorder()).setTitle(PeptideShakerGUI.TITLED_BORDER_HORIZONTAL_PADDING + "Peptides" + PeptideShakerGUI.TITLED_BORDER_HORIZONTAL_PADDING);
plotsPanel.repaint();