Package org.jrdf.graph.global

Examples of org.jrdf.graph.global.MoleculeLocalizerImpl


            new LongIndexAdapter(structureIndexes[1]), new LongIndexAdapter(structureIndexes[2])};
        IteratorTrackingCollectionFactory collectionFactory = base.createCollectionFactory(graphNumber);
        Graph graph = new OrderedGraphFactoryImpl(longIndexes, nodePool, collectionFactory).getGraph();
        final long curMaxMoleculeId = readIndex.getMaxMoleculeId();
        Localizer localizer = new LocalizerImpl(nodePool, STRING_MAPPER);
        MoleculeLocalizer moleculeLocalizer = new MoleculeLocalizerImpl(localizer, curMaxMoleculeId);
        return new MoleculeGraphImpl(writeIndex, readIndex, moleculeLocalizer, graph, nodePool);
    }
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        ReadableIndex<Long> readIndex = new ReadableIndexImpl(structureIndexes);
        WritableIndex<Long> writeIndex = new WritableIndexImpl(structureIndexes);
        NodePoolFactory nodePoolFactory = new MemNodePoolFactory();
        NodePool nodePool = nodePoolFactory.createNewNodePool();
        Localizer localizer = new LocalizerImpl(nodePool, STRING_MAPPER);
        MoleculeLocalizer moleculeLocalizer = new MoleculeLocalizerImpl(localizer);
        LongIndex[] longIndexes = new LongIndex[]{new LongIndexAdapter(structureIndexes[0]),
            new LongIndexAdapter(structureIndexes[1]), new LongIndexAdapter(structureIndexes[2])};
        IteratorTrackingCollectionFactory collectionFactory = new MemCollectionFactory();
        Graph graph = new OrderedGraphFactoryImpl(longIndexes, nodePool, collectionFactory).getGraph();
        return new MoleculeGraphImpl(writeIndex, readIndex, moleculeLocalizer, graph, nodePool);
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        MoleculeStructureIndex<Long>[] structureIndexes = createMoleculeStructureIndexes();
        ReadableIndex<Long> readIndex = new ReadableIndexImpl(structureIndexes);
        WritableIndex<Long> writeIndex = new WritableIndexImpl(structureIndexes);
        NodePool nodePool = nodePoolFactory.createNewNodePool();
        Localizer localizer = new LocalizerImpl(nodePool, STRING_MAPPER);
        MoleculeLocalizer moleculeLocalizer = new MoleculeLocalizerImpl(localizer);
        LongIndex[] longIndexes = new LongIndex[]{new LongIndexAdapter(structureIndexes[0]),
            new LongIndexAdapter(structureIndexes[1]), new LongIndexAdapter(structureIndexes[2])};
        collectionFactory = new BdbCollectionFactory(BDB_HANDLER, "collection" + graphNumber);
        Graph graph = new OrderedGraphFactoryImpl(longIndexes, nodePool, collectionFactory).getGraph();
        graph.clear();
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        MoleculeStructureIndex<Long>[] structureIndexes = createMoleculeStructureIndexes();
        ReadableIndex<Long> readIndex = new ReadableIndexImpl(structureIndexes);
        WritableIndex<Long> writeIndex = new WritableIndexImpl(structureIndexes);
        NodePool nodePool = nodePoolFactory.createNewNodePool();
        Localizer localizer = new LocalizerImpl(nodePool, STRING_MAPPER);
        MoleculeLocalizer moleculeLocalizer = new MoleculeLocalizerImpl(localizer);
        LongIndex[] longIndexes = new LongIndex[]{new LongIndexAdapter(structureIndexes[0]),
            new LongIndexAdapter(structureIndexes[1]), new LongIndexAdapter(structureIndexes[2])};
        collectionFactory = new BdbCollectionFactory(BDB_HANDLER, "collection" + graphNumber);
        Graph graph = new OrderedGraphFactoryImpl(longIndexes, nodePool, collectionFactory).getGraph();
        graph.clear();
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