Package org.data2semantics.exp.old.utils.datasets

Examples of org.data2semantics.exp.old.utils.datasets.PropertyPredictionDataSetParameters

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     *
     */   
    List<PropertyPredictionDataSetParameters> dataSetsParams = new ArrayList<PropertyPredictionDataSetParameters>();

   
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, false, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, false, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, false, true));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, false, true));
   
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, true, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, true, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, true, true));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, true, true));
   
    /*
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetB, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, false, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetB, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, false, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetB, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, false, true));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetB, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, false, true));
   
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetB, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, true, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetB, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, true, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetB, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, true, true));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetB, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, true, true));
    //*/   
 

    try {
     
     
 
 
      for (PropertyPredictionDataSetParameters params : dataSetsParams) {
        dataset = DataSetFactory.createPropertyPredictionDataSet(params);
        dataset.removeSmallClasses(5);
        dataset.removeVertexAndEdgeLabels();

        resultsWL.newRow(dataset.getLabel() + " WLSubTreeKernel");
        for (int i = 0; i < 3; i++) {
          if (experimenter.hasSpace()) { 
            int fileId = (int) (Math.random() * 100000000); 
            File file = new File(DATA_DIR + fileId + "_" + "WL" + "_" + i + ".txt");
            WLSubTreeKernel kernel = new WLSubTreeKernel(i, true);
            exp = new PropertyPredictionExperiment(new PropertyPredictionDataSet(dataset), kernel, seeds, cs, new FileOutputStream(file));
            experimenter.addExperiment(exp);
            resultsWL.addResult(exp.getResults().getAccuracy());
            resultsWL.addResult(exp.getResults().getF1());
           
            System.out.println("Running WL, it " + i + " on " + dataset.getLabel());
          }
        }

       
        resultsSTF.newRow(dataset.getLabel() + " IntersectionFullSubTree");
        for (int i = 0; i < 3; i++) {

          if (experimenter.hasSpace()) {   
            int fileId = (int) (Math.random() * 100000000); 
            File file = new File(DATA_DIR + fileId + "_" + "IntersectionFullSubTree" + "_" + i + ".txt");
            exp = new PropertyPredictionExperiment(new PropertyPredictionDataSet(dataset), new IntersectionSubTreeKernel(i, 1), seeds, cs, new FileOutputStream(file));
            experimenter.addExperiment(exp);
            resultsSTF.addResult(exp.getResults().getAccuracy());
            resultsSTF.addResult(exp.getResults().getF1());
           
            System.out.println("Running STF, it " + i + " on " + dataset.getLabel());
          }

        }

        resultsSTP.newRow(dataset.getLabel() + " IntersectionPartialSubTree");
        for (int i = 0; i < 3; i++) {
          if (experimenter.hasSpace()) {   
            int fileId = (int) (Math.random() * 100000000); 
            File file = new File(DATA_DIR + fileId + "_" + "IntersectionPartialSubTree" + "_" + i + ".txt");
            exp = new PropertyPredictionExperiment(new PropertyPredictionDataSet(dataset), new IntersectionPartialSubTreeKernel(i, 0.01), seeds, cs, new FileOutputStream(file));
            experimenter.addExperiment(exp);
            resultsSTP.addResult(exp.getResults().getAccuracy());
            resultsSTP.addResult(exp.getResults().getF1());
           
            System.out.println("Running STP, it " + i + " on " + dataset.getLabel());
          }
        }


       
        resultsIGP.newRow(dataset.getLabel() + " IntersectionGraphPath");
        for (int i = 1; i < 3; i++) {
          if (experimenter.hasSpace()) {   
            int fileId = (int) (Math.random() * 100000000); 
            File file = new File(DATA_DIR + fileId + "_" + "IntersectionGraphPath" + "_" + i + ".txt");
            exp = new PropertyPredictionExperiment(new PropertyPredictionDataSet(dataset), new IntersectionGraphPathKernel(i, 1), seeds, cs, new FileOutputStream(file));
            experimenter.addExperiment(exp);
            resultsIGP.addResult(exp.getResults().getAccuracy());
            resultsIGP.addResult(exp.getResults().getF1());
           
            System.out.println("Running IGP, it " + i + " on " + dataset.getLabel());
          }
        }       

        resultsIGW.newRow(dataset.getLabel() + " IntersectionGraphWalk");
        for (int i = 1; i < 3; i++) {
          if (experimenter.hasSpace()) {   
            int fileId = (int) (Math.random() * 100000000); 
            File file = new File(DATA_DIR + fileId + "_" + "IntersectionGraphWalk" + "_" + i + ".txt");
            exp = new PropertyPredictionExperiment(new PropertyPredictionDataSet(dataset), new IntersectionGraphWalkKernel(i, 1), seeds, cs, new FileOutputStream(file));
            experimenter.addExperiment(exp);
            resultsIGW.addResult(exp.getResults().getAccuracy());
            resultsIGW.addResult(exp.getResults().getF1());
           
            System.out.println("Running IGW, it " + i + " on " + dataset.getLabel());
          }
        }
       
      }
     
      //*/
     

      /******
       * ADDITIONAL EXPERIMENTS
       */
      dataSetsParams = new ArrayList<PropertyPredictionDataSetParameters>();
     
     
     
      dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, false, false));
      dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, false, false));
      dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 3, false, false));
      //dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 4, false, false));

     
      dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, false, true));
      dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, false, true));
      dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 3, false, true));
     

     
      for (PropertyPredictionDataSetParameters params : dataSetsParams) {
        dataset = DataSetFactory.createPropertyPredictionDataSet(params);
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    long[] seeds = {11,21,31,41,51,61,71,81,91,101};
    double[] cs = {0.01, 0.1, 1, 10, 100}; 
    //double[] cs = {1}; 


    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, false, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, false, false));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, false, true));
    dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, false, true));

   
    //dataSetsParams.add(new DataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, true, false));
    //dataSetsParams.add(new PropertyPredictionDataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 2, true, false));
    //dataSetsParams.add(new DataSetParameters(testSetA, "http://swrc.ontoware.org/ontology#affiliation", "http://swrc.ontoware.org/ontology#employs", 1, true, true));
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Related Classes of org.data2semantics.exp.old.utils.datasets.PropertyPredictionDataSetParameters

  • org.data2semantics.exp.experiments.ClassificationExperimentTest
  • org.data2semantics.exp.old.AffiliationPredictionExperiment
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